Full Link:
STRINGSTRING
Si002838m Si002838m Si034701m Si034701m Si014665m Si014665m Si037238m Si037238m Si020385m Si020385m Si018215m Si018215m Si004808m Si004808m Si002038m Si002038m Si002836m Si002836m Si002863m Si002863m Si002858m Si002858m
"Si002038m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002038mUncharacterized protein (350 aa)    
Predicted Functional Partners:
Si037238m
Uncharacterized protein (241 aa)
     
  0.998
Si018215m
Golgi SNAP receptor complex member 1 ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (242 aa)
     
  0.998
Si004808m
Uncharacterized protein (360 aa)
     
  0.998
Si002863m
Uncharacterized protein (218 aa)
     
  0.997
Si002858m
Uncharacterized protein (218 aa)
     
  0.997
Si020385m
Uncharacterized protein (121 aa)
     
  0.997
Si014665m
Uncharacterized protein (122 aa)
     
  0.997
Si034701m
Uncharacterized protein (623 aa)
     
  0.993
Si002838m
Uncharacterized protein (221 aa)
     
  0.986
Si002836m
Uncharacterized protein (221 aa)
     
  0.986
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)