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Si010403m Si010403m Si030627m Si030627m Si030190m Si030190m Si040072m Si040072m Si029341m Si029341m Si010412m Si010412m Si029923m Si029923m Si002092m Si002092m Si009870m Si009870m Si013583m Si013583m Si016884m Si016884m
"Si002092m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002092mUncharacterized protein (342 aa)    
Predicted Functional Partners:
Si016884m
Aldehyde dehydrogenase (528 aa)
   
  0.954
Si029341m
Isocitrate lyase (573 aa)
         
  0.906
Si013583m
Uncharacterized protein (509 aa)
         
  0.903
Si009870m
Uncharacterized protein (512 aa)
         
  0.903
Si010403m
Uncharacterized protein (367 aa)
     
 
  0.902
Si040072m
Uncharacterized protein (368 aa)
       
    0.901
Si030627m
Uncharacterized protein (305 aa)
       
    0.901
Si030190m
Uncharacterized protein (377 aa)
       
    0.901
Si029923m
Uncharacterized protein (428 aa)
       
    0.901
Si010412m
Uncharacterized protein (367 aa)
       
    0.901
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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