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Si028948m Si028948m Si019044m Si019044m Si037483m Si037483m Si040043m Si040043m Si023446m Si023446m Si002133m Si002133m Si013502m Si013502m Si021344m Si021344m Si000465m Si000465m Si023443m Si023443m Si016347m Si016347m
"Si002133m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002133mUncharacterized protein (337 aa)    
Predicted Functional Partners:
Si013502m
Uncharacterized protein (555 aa)
   
 
  0.961
Si019044m
Uncharacterized protein (1700 aa)
   
 
  0.839
Si016347m
Uncharacterized protein (799 aa)
       
  0.729
Si023446m
Uncharacterized protein (171 aa)
 
   
  0.727
Si028948m
Uncharacterized protein (816 aa)
 
     
  0.713
Si023443m
Uncharacterized protein (172 aa)
 
   
  0.704
Si037483m
Uncharacterized protein (212 aa)
 
   
  0.695
Si021344m
Uncharacterized protein (719 aa)
 
   
0.637
Si000465m
Uncharacterized protein (723 aa)
       
0.617
Si040043m
Uncharacterized protein (453 aa)
   
 
  0.615
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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