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Si022172m Si022172m Si001623m Si001623m Si000669m Si000669m Si002282m Si002282m Si013492m Si013492m Si034817m Si034817m Si009589m Si009589m Si021461m Si021461m Si009832m Si009832m
"Si002282m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002282mUncharacterized protein (318 aa)    
Predicted Functional Partners:
Si034817m
Hexosyltransferase (591 aa)
           
  0.495
Si022172m
Uncharacterized protein (415 aa)
           
  0.468
Si009832m
Uncharacterized protein (522 aa)
           
  0.468
Si001623m
Uncharacterized protein (415 aa)
           
  0.468
Si009589m
Hexosyltransferase (637 aa)
           
  0.440
Si021461m
Hexosyltransferase (631 aa)
           
  0.416
Si000669m
Hexosyltransferase (630 aa)
           
  0.416
Si013492m
Uncharacterized protein (571 aa)
     
   
  0.408
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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