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Si040878m Si040878m Si002312m Si002312m Si030546m Si030546m Si013653m Si013653m Si036941m Si036941m Si036385m Si036385m Si029595m Si029595m Si030460m Si030460m Si001590m Si001590m Si022152m Si022152m Si027230m Si027230m
"Si002312m" - Cytidine deaminase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002312mCytidine deaminase (314 aa)    
Predicted Functional Partners:
Si029595m
Uridine kinase (499 aa)
   
 
  0.984
Si022152m
Uncharacterized protein (420 aa)
   
 
  0.984
Si013653m
Uridine kinase (484 aa)
   
 
  0.984
Si036941m
Thymidine kinase (281 aa)
       
  0.945
Si030460m
Uncharacterized protein (333 aa)
   
 
  0.938
Si027230m
Uncharacterized protein (58 aa)
   
 
  0.938
Si030546m
Uncharacterized protein (321 aa)
       
    0.903
Si001590m
Uncharacterized protein (421 aa)
       
    0.903
Si036385m
Uncharacterized protein (353 aa)
         
    0.900
Si040878m
Uncharacterized protein (132 aa)
     
 
  0.870
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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