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Si034382m Si034382m Si035787m Si035787m Si003963m Si003963m Si021549m Si021549m Si002353m Si002353m Si001030m Si001030m Si013387m Si013387m Si015081m Si015081m Si005548m Si005548m
"Si002353m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002353mUncharacterized protein (307 aa)    
Predicted Functional Partners:
Si003963m
Uncharacterized protein (619 aa)
           
  0.457
Si015081m
Uncharacterized protein (247 aa)
           
  0.454
Si005548m
Uncharacterized protein (309 aa)
           
  0.440
Si021549m
Uncharacterized protein (595 aa)
           
  0.426
Si035787m
Uncharacterized protein (433 aa)
           
  0.420
Si034382m
Uncharacterized protein (753 aa)
           
  0.420
Si013387m
Reticulon-like protein (651 aa)
           
  0.420
Si001030m
Uncharacterized protein (521 aa)
           
  0.420
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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