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Si007154m Si007154m Si035684m Si035684m Si029836m Si029836m Si030866m Si030866m Si035546m Si035546m Si037482m Si037482m Si007052m Si007052m Si002354m Si002354m Si024273m Si024273m Si017471m Si017471m Si009686m Si009686m
"Si002354m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002354mUncharacterized protein (307 aa)    
Predicted Functional Partners:
Si035546m
Uncharacterized protein (466 aa)
     
  0.991
Si007154m
Proteasome subunit alpha type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (250 aa)
     
  0.991
Si017471m
Uncharacterized protein (389 aa)
     
  0.991
Si009686m
Uncharacterized protein (581 aa)
     
  0.991
Si037482m
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (212 aa)
     
  0.990
Si035684m
Uncharacterized protein (447 aa)
     
  0.988
Si029836m
Uncharacterized protein (447 aa)
     
  0.988
Si024273m
Uncharacterized protein (272 aa)
     
  0.988
Si007052m
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (280 aa)
     
  0.986
Si030866m
Proteasome subunit beta type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (257 aa)
     
  0.985
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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