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Si016597m Si016597m Si002455m Si002455m Si029820m Si029820m Si034039m Si034039m Si021460m Si021460m Si026975m Si026975m Si034037m Si034037m Si000300m Si000300m Si023579m Si023579m Si034151m Si034151m Si001536m Si001536m
"Si002455m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002455mUncharacterized protein (289 aa)    
Predicted Functional Partners:
Si034039m
Uncharacterized protein (1043 aa)
     
  0.746
Si026975m
Uncharacterized protein (142 aa)
       
    0.720
Si023579m
Uncharacterized protein (142 aa)
       
    0.720
Si016597m
Uncharacterized protein (652 aa)
           
  0.661
Si034037m
Uncharacterized protein (1044 aa)
       
  0.623
Si034151m
Beta-adaptin-like protein ; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (898 aa)
     
    0.572
Si000300m
Uncharacterized protein (843 aa)
     
    0.572
Si001536m
Uncharacterized protein (429 aa)
     
    0.515
Si029820m
Uncharacterized protein (450 aa)
     
    0.507
Si021460m
Uncharacterized protein (632 aa)
     
    0.507
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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