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Si026662m Si026662m Si040161m Si040161m Si002838m Si002838m Si036889m Si036889m Si018215m Si018215m Si002836m Si002836m Si014189m Si014189m Si002485m Si002485m Si004808m Si004808m Si010973m Si010973m Si003090m Si003090m
"Si002485m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002485mUncharacterized protein (283 aa)    
Predicted Functional Partners:
Si002836m
Uncharacterized protein (221 aa)
     
  0.993
Si002838m
Uncharacterized protein (221 aa)
     
  0.992
Si004808m
Uncharacterized protein (360 aa)
     
  0.991
Si040161m
Uncharacterized protein (252 aa)
     
  0.990
Si010973m
Uncharacterized protein (231 aa)
     
  0.990
Si018215m
Golgi SNAP receptor complex member 1 ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (242 aa)
     
  0.969
Si036889m
Uncharacterized protein (289 aa)
     
  0.956
Si014189m
Uncharacterized protein (289 aa)
     
  0.956
Si026662m
Uncharacterized protein (315 aa)
     
  0.953
Si003090m
Uncharacterized protein (177 aa)
     
  0.953
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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