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Si002644m Si002644m Si002844m Si002844m Si019252m Si019252m Si019871m Si019871m Si023187m Si023187m ABH1 ABH1 Si002563m Si002563m Si016066m Si016066m Si007242m Si007242m Si013401m Si013401m Si005946m Si005946m
"Si002563m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002563mUncharacterized protein (266 aa)    
Predicted Functional Partners:
Si019252m
Uncharacterized protein (281 aa)
     
  0.880
Si023187m
GTP-binding nuclear protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
         
  0.801
Si007242m
GTP-binding nuclear protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
         
  0.801
Si002844m
GTP-binding nuclear protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
         
  0.801
Si002644m
GTP-binding nuclear protein ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (255 aa)
         
  0.801
ABH1
Nuclear cap-binding protein subunit 1 (887 aa)
     
  0.663
Si019871m
Uncharacterized protein (680 aa)
     
 
  0.613
Si013401m
Uncharacterized protein (641 aa)
     
 
  0.613
Si005946m
Uncharacterized protein (716 aa)
     
 
  0.613
Si016066m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2050 aa)
     
 
  0.479
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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