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Si033274m Si033274m Si034368m Si034368m Si013398m Si013398m Si026170m Si026170m Si002653m Si002653m Si029202m Si029202m Si000107m Si000107m Si000440m Si000440m Si027279m Si027279m Si021308m Si021308m Si016922m Si016922m
"Si002653m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002653mUncharacterized protein (253 aa)    
Predicted Functional Partners:
Si016922m
Uncharacterized protein (518 aa)
     
   
  0.551
Si021308m
Uncharacterized protein (748 aa)
     
 
  0.543
Si000440m
Uncharacterized protein (735 aa)
     
 
  0.543
Si029202m
Uncharacterized protein (630 aa)
     
   
  0.485
Si026170m
Uncharacterized protein (566 aa)
     
   
  0.485
Si034368m
Uncharacterized protein (760 aa)
           
  0.468
Si033274m
Uncharacterized protein (661 aa)
           
  0.468
Si013398m
Uncharacterized protein (644 aa)
           
  0.463
Si000107m
Uncharacterized protein (1160 aa)
     
   
  0.438
Si027279m
Uncharacterized protein (625 aa)
     
   
  0.404
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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