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Si008450m Si008450m Si037974m Si037974m Si024595m Si024595m Si026791m Si026791m Si002809m Si002809m Si018354m Si018354m Si018099m Si018099m Si007203m Si007203m Si036292m Si036292m Si031097m Si031097m Si013672m Si013672m
"Si002809m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002809mUncharacterized protein (227 aa)    
Predicted Functional Partners:
Si018099m
Peptidyl-prolyl cis-trans isomerase (267 aa)
     
   
  0.659
Si018354m
Uncharacterized protein (209 aa)
     
        0.628
Si013672m
Uncharacterized protein (476 aa)
     
   
  0.612
Si036292m
Uncharacterized protein (365 aa)
     
   
  0.522
Si024595m
Uncharacterized protein (228 aa)
     
        0.516
Si008450m
Uncharacterized protein (218 aa)
     
        0.516
Si007203m
Uncharacterized protein (233 aa)
     
        0.516
Si037974m
Uncharacterized protein (136 aa)
     
   
  0.513
Si031097m
Uncharacterized protein (211 aa)
     
 
  0.487
Si026791m
Uncharacterized protein (241 aa)
     
   
  0.475
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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