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Si004218m Si004218m Si014617m Si014617m Si022962m Si022962m Si028862m Si028862m Si002880m Si002880m Si018055m Si018055m Si000282m Si000282m Si009249m Si009249m
"Si002880m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002880mUncharacterized protein (216 aa)    
Predicted Functional Partners:
Si014617m
Uncharacterized protein (140 aa)
       
      0.616
Si028862m
Uncharacterized protein (913 aa)
       
      0.557
Si022962m
Proteasome subunit alpha type ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (267 aa)
       
      0.557
Si018055m
Uncharacterized protein (275 aa)
       
      0.557
Si009249m
Uncharacterized protein (1011 aa)
       
      0.557
Si004218m
Uncharacterized protein (204 aa)
       
      0.557
Si000282m
Uncharacterized protein (857 aa)
       
      0.557
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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