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Si029300m Si029300m Si040704m Si040704m Si029814m Si029814m Si035094m Si035094m Si034836m Si034836m Si002992m Si002992m Si034667m Si034667m Si029268m Si029268m Si029431m Si029431m CDPK1 CDPK1 Si029399m Si029399m
"Si002992m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si002992mUncharacterized protein (196 aa)    
Predicted Functional Partners:
Si040704m
Uncharacterized protein (527 aa)
       
  0.810
Si035094m
Uncharacterized protein (535 aa)
       
  0.810
Si034836m
Uncharacterized protein (588 aa)
       
  0.810
Si034667m
Uncharacterized protein (632 aa)
       
  0.810
Si029814m
Uncharacterized protein (452 aa)
       
  0.810
CDPK1
Calcium-dependent protein kinase 2 (531 aa)
       
  0.810
Si029431m
Uncharacterized protein (541 aa)
       
  0.810
Si029399m
Uncharacterized protein (553 aa)
       
  0.810
Si029300m
Uncharacterized protein (592 aa)
       
  0.810
Si029268m
Uncharacterized protein (604 aa)
       
  0.810
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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