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Si003072m Si003072m Si031073m Si031073m Si033140m Si033140m Si035961m Si035961m Si002874m Si002874m Si031449m Si031449m Si032841m Si032841m Si014438m Si014438m Si004525m Si004525m Si002374m Si002374m rpoA rpoA
"Si003072m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si003072mUncharacterized protein (181 aa)    
Predicted Functional Partners:
Si032841m
Uncharacterized protein (136 aa)
     
  0.999
Si031449m
Uncharacterized protein (141 aa)
     
  0.999
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si004525m
Uncharacterized protein (298 aa)
   
  0.998
Si002374m
Uncharacterized protein (303 aa)
   
  0.998
Si031073m
Ribosomal protein (216 aa)
   
  0.998
Si014438m
Ribosomal protein (217 aa)
   
  0.998
Si002874m
Ribosomal protein (216 aa)
   
  0.998
Si035961m
Uncharacterized protein (404 aa)
   
  0.998
Si033140m
Uncharacterized protein (274 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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