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Si021344m Si021344m Si016347m Si016347m Si016643m Si016643m Si000465m Si000465m Si002133m Si002133m Si019044m Si019044m Si003179m Si003179m Si035944m Si035944m Si009783m Si009783m Si011869m Si011869m Si009663m Si009663m
"Si003179m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si003179mUncharacterized protein (160 aa)    
Predicted Functional Partners:
Si021344m
Uncharacterized protein (719 aa)
   
  0.748
Si016347m
Uncharacterized protein (799 aa)
   
  0.748
Si000465m
Uncharacterized protein (723 aa)
   
  0.748
Si011869m
Uncharacterized protein (201 aa)
     
 
  0.586
Si002133m
Uncharacterized protein (337 aa)
       
  0.565
Si016643m
Uncharacterized protein (625 aa)
   
 
    0.532
Si035944m
Uncharacterized protein (406 aa)
     
      0.516
Si009783m
Uncharacterized protein (537 aa)
     
      0.516
Si009663m
Uncharacterized protein (593 aa)
     
      0.516
Si019044m
Uncharacterized protein (1700 aa)
         
  0.445
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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