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Si010390m Si010390m Si003879m Si003879m Si022912m Si022912m Si003306m Si003306m Si011891m Si011891m Si036805m Si036805m
"Si003306m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si003306mUncharacterized protein (137 aa)    
Predicted Functional Partners:
Si011891m
Uncharacterized protein (402 aa)
           
  0.418
Si010390m
Uncharacterized protein (371 aa)
           
  0.418
Si003879m
Auxin efflux carrier component ; May act as a component of the auxin efflux carrier (423 aa)
           
  0.418
Si036805m
Uncharacterized protein (301 aa)
     
   
  0.401
Si022912m
Uncharacterized protein (279 aa)
     
   
  0.401
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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