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Si030204m Si030204m Si040154m Si040154m Si032614m Si032614m Si039580m Si039580m Si036641m Si036641m Si003854m Si003854m Si033284m Si033284m Si029287m Si029287m Si032143m Si032143m Si032329m Si032329m Si032068m Si032068m
"Si003854m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si003854mUncharacterized protein (416 aa)    
Predicted Functional Partners:
Si040154m
Pectinesterase (585 aa)
       
  0.462
Si039580m
Pectinesterase (328 aa)
       
  0.462
Si036641m
Pectinesterase (322 aa)
       
  0.462
Si033284m
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (304 aa)
       
  0.462
Si032614m
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (565 aa)
       
  0.462
Si032329m
Pectinesterase (634 aa)
       
  0.462
Si032143m
Pectinesterase (304 aa)
       
  0.462
Si032068m
Pectinesterase (352 aa)
       
  0.462
Si030204m
Pectinesterase (374 aa)
       
  0.462
Si029287m
Pectinesterase (598 aa)
       
  0.462
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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