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Si037749m Si037749m Si035741m Si035741m Si035105m Si035105m Si035178m Si035178m Si004227m Si004227m Si035126m Si035126m Si001314m Si001314m Si020943m Si020943m Si009836m Si009836m Si000006m Si000006m Si001384m Si001384m
"Si004227m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004227mUncharacterized protein (334 aa)    
Predicted Functional Partners:
Si035741m
Flavin-containing monooxygenase (440 aa)
   
     
  0.528
Si001314m
Flavin-containing monooxygenase (470 aa)
   
          0.523
Si035126m
Flavin-containing monooxygenase (529 aa)
   
          0.522
Si035105m
Uncharacterized protein (533 aa)
   
          0.519
Si035178m
Uncharacterized protein (522 aa)
   
          0.518
Si009836m
Uncharacterized protein (521 aa)
   
          0.513
Si020943m
Uncharacterized protein (2158 aa)
   
   
  0.480
Si000006m
Uncharacterized protein (2163 aa)
   
   
  0.480
Si001384m
Uncharacterized protein (456 aa)
           
  0.468
Si037749m
Uncharacterized protein (175 aa)
       
      0.449
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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