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Si035509m Si035509m Si016862m Si016862m Si032915m Si032915m Si035450m Si035450m Si004288m Si004288m Si016769m Si016769m Si026033m Si026033m Si029635m Si029635m Si021007m Si021007m
"Si004288m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004288mUncharacterized protein (564 aa)    
Predicted Functional Partners:
Si016769m
Phosphate transporter ; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (572 aa)
     
 
  0.553
Si026033m
Uncharacterized protein (710 aa)
   
     
  0.510
Si032915m
Uncharacterized protein (403 aa)
   
          0.485
Si035450m
Uncharacterized protein (480 aa)
   
          0.477
Si035509m
Uncharacterized protein (472 aa)
   
          0.467
Si029635m
Uncharacterized protein (491 aa)
   
          0.463
Si016862m
Uncharacterized protein (535 aa)
   
     
  0.450
Si021007m
Structural maintenance of chromosomes protein (1243 aa)
           
  0.408
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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