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Si032594m Si032594m Si036235m Si036235m Si007831m Si007831m Si019646m Si019646m Si004358m Si004358m Si025127m Si025127m Si016274m Si016274m Si001832m Si001832m Si013224m Si013224m Si007909m Si007909m
"Si004358m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004358mUncharacterized protein (348 aa)    
Predicted Functional Partners:
Si001832m
Uncharacterized protein (382 aa)
   
   
0.919
Si036235m
Uncharacterized protein (373 aa)
   
   
0.914
Si025127m
Uncharacterized protein (371 aa)
   
   
 
0.914
Si032594m
Uncharacterized protein (400 aa)
   
   
0.912
Si019646m
Uncharacterized protein (922 aa)
     
   
  0.487
Si016274m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (889 aa)
     
   
  0.487
Si013224m
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
   
  0.487
Si007909m
Uncharacterized protein (327 aa)
   
          0.421
Si007831m
Uncharacterized protein (240 aa)
   
          0.405
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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