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Si001731m Si001731m Si029353m Si029353m Si026433m Si026433m Si021825m Si021825m Si004459m Si004459m Si000965m Si000965m Si011756m Si011756m Si012026m Si012026m Si020091m Si020091m
"Si004459m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004459mUncharacterized protein (290 aa)    
Predicted Functional Partners:
Si021825m
Uncharacterized protein (503 aa)
       
 
  0.657
Si000965m
Uncharacterized protein (537 aa)
       
 
  0.657
Si029353m
Uncharacterized protein (571 aa)
       
      0.608
Si020091m
Uncharacterized protein (268 aa)
     
   
  0.496
Si001731m
Uncharacterized protein (399 aa)
           
  0.461
Si026433m
Uncharacterized protein (412 aa)
     
   
  0.448
Si012026m
Uncharacterized protein (409 aa)
     
   
  0.448
Si011756m
Uncharacterized protein (389 aa)
           
  0.410
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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