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Si009412m Si009412m Si026004m Si026004m Si034135m Si034135m Si039054m Si039054m Si016091m Si016091m Si023023m Si023023m Si017006m Si017006m Si004571m Si004571m Si009721m Si009721m Si005811m Si005811m Si009740m Si009740m
"Si004571m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004571mUncharacterized protein (550 aa)    
Predicted Functional Partners:
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
     
  0.887
Si023023m
Uncharacterized protein (255 aa)
     
  0.884
Si034135m
Uncharacterized protein (915 aa)
     
  0.739
Si026004m
Uncharacterized protein (786 aa)
     
  0.739
Si017006m
Uncharacterized protein (497 aa)
     
  0.739
Si009721m
Uncharacterized protein (564 aa)
     
  0.739
Si009412m
Uncharacterized protein (780 aa)
     
  0.739
Si005811m
Uncharacterized protein (913 aa)
     
  0.739
Si039054m
Uncharacterized protein (244 aa)
     
    0.697
Si009740m
Uncharacterized protein (557 aa)
     
    0.697
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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