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Si039581m Si039581m Si029123m Si029123m Si034955m Si034955m Si034827m Si034827m Si035441m Si035441m Si004722m Si004722m Si035034m Si035034m Si026393m Si026393m Si034649m Si034649m Si029187m Si029187m Si032233m Si032233m
"Si004722m" - Pectinesterase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004722mPectinesterase (180 aa)    
Predicted Functional Partners:
Si039581m
Uncharacterized protein (412 aa)
         
    0.900
Si035441m
Pectate lyase (481 aa)
         
    0.900
Si035034m
Hexosyltransferase (546 aa)
         
    0.900
Si034955m
Hexosyltransferase (562 aa)
         
    0.900
Si034827m
Hexosyltransferase (589 aa)
         
    0.900
Si034649m
Hexosyltransferase (637 aa)
         
    0.900
Si032233m
Uncharacterized protein (417 aa)
         
    0.900
Si029187m
Hexosyltransferase (643 aa)
         
    0.900
Si029123m
Hexosyltransferase (682 aa)
         
    0.900
Si026393m
Glycosyl transferase (434 aa)
         
    0.900
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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