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Si004863m Si004863m Si039580m Si039580m Si036641m Si036641m Si032614m Si032614m Si030204m Si030204m Si004860m Si004860m Si029287m Si029287m Si004506m Si004506m Si024215m Si024215m Si022230m Si022230m Si019694m Si019694m
"Si004860m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004860mUncharacterized protein (425 aa)    
Predicted Functional Partners:
Si024215m
Pectinesterase (425 aa)
   
 
  0.947
Si032614m
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (565 aa)
   
 
  0.945
Si039580m
Pectinesterase (328 aa)
       
  0.943
Si036641m
Pectinesterase (322 aa)
       
  0.943
Si030204m
Pectinesterase (374 aa)
       
  0.943
Si029287m
Pectinesterase (598 aa)
       
  0.943
Si022230m
Pectinesterase (401 aa)
       
  0.943
Si019694m
Pectinesterase (386 aa)
       
  0.943
Si004863m
Pectinesterase (387 aa)
       
  0.943
Si004506m
Pectinesterase ; Acts in the modification of cell walls via demethylesterification of cell wall pectin (322 aa)
       
  0.943
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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