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Si035380m Si035380m Si016091m Si016091m Si017691m Si017691m Si035394m Si035394m Si009629m Si009629m Si004945m Si004945m Si019216m Si019216m Si026179m Si026179m Si035010m Si035010m Si034807m Si034807m Si026139m Si026139m
"Si004945m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si004945mUncharacterized protein (350 aa)    
Predicted Functional Partners:
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
         
  0.655
Si019216m
Uncharacterized protein (352 aa)
   
   
  0.632
Si017691m
Uncharacterized protein (345 aa)
   
 
  0.574
Si034807m
Uncharacterized protein (593 aa)
   
   
  0.557
Si026179m
Uncharacterized protein (557 aa)
   
   
  0.557
Si035394m
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (489 aa)
   
 
  0.555
Si035380m
Adenylosuccinate synthetase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (491 aa)
   
 
  0.555
Si035010m
Uncharacterized protein (551 aa)
         
  0.554
Si009629m
Uncharacterized protein (611 aa)
   
   
  0.545
Si026139m
Uncharacterized protein (597 aa)
   
   
  0.544
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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