Full Link:
close STRING Website Improvement Campaign
deny allow Over the next 24 hours, we are collecting usage information on the web-interface (learn more).   Do you allow anonymous tracking of your activity ?
STRINGSTRING
Si035790m Si035790m Si010555m Si010555m Si005042m Si005042m Si010020m Si010020m Si022135m Si022135m Si034785m Si034785m Si029885m Si029885m Si022744m Si022744m Si022093m Si022093m Si017876m Si017876m Si017799m Si017799m
"Si005042m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005042mUncharacterized protein (280 aa)    
Predicted Functional Partners:
Si035790m
WD repeat-containing protein 4 homolog ; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit (433 aa)
     
  0.987
Si010555m
Uncharacterized protein (334 aa)
     
  0.783
Si010020m
Uncharacterized protein (471 aa)
     
 
  0.755
Si017799m
Uncharacterized protein (323 aa)
     
        0.753
Si029885m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
        0.732
Si022093m
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (435 aa)
     
        0.732
Si022744m
Uncharacterized protein (309 aa)
     
        0.714
Si017876m
Uncharacterized protein (310 aa)
     
        0.714
Si034785m
Uncharacterized protein (601 aa)
     
   
  0.697
Si022135m
Uncharacterized protein (425 aa)
     
   
  0.697
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (6%)