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Si031270m Si031270m Si009169m Si009169m Si033113m Si033113m Si037339m Si037339m Si007449m Si007449m Si031392m Si031392m Si031442m Si031442m Si005059m Si005059m Si021349m Si021349m Si022890m Si022890m Si016066m Si016066m
"Si005059m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005059mUncharacterized protein (103 aa)    
Predicted Functional Partners:
Si031392m
Uncharacterized protein (150 aa)
   
  0.982
Si016066m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2050 aa)
     
  0.977
Si009169m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1546 aa)
     
  0.977
Si007449m
Uncharacterized protein (144 aa)
     
  0.970
Si033113m
Uncharacterized protein (230 aa)
     
  0.968
Si021349m
Uncharacterized protein (711 aa)
       
  0.965
Si037339m
Uncharacterized protein (230 aa)
     
  0.962
Si031442m
Uncharacterized protein (143 aa)
     
  0.962
Si031270m
Uncharacterized protein (175 aa)
     
  0.960
Si022890m
Uncharacterized protein (283 aa)
     
  0.960
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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