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Si007950m Si007950m Si032454m Si032454m Si024610m Si024610m Si022114m Si022114m Si016954m Si016954m Si005111m Si005111m Si015686m Si015686m Si001073m Si001073m Si013512m Si013512m Si012089m Si012089m Si009810m Si009810m
"Si005111m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005111mUncharacterized protein (533 aa)    
Predicted Functional Partners:
Si032454m
Uncharacterized protein (379 aa)
   
     
  0.665
Si024610m
Uncharacterized protein (424 aa)
   
     
  0.665
Si012089m
Uncharacterized protein (499 aa)
   
     
  0.665
Si013512m
Uncharacterized protein (549 aa)
   
     
  0.665
Si016954m
Uncharacterized protein (507 aa)
   
     
  0.664
Si009810m
Uncharacterized protein (529 aa)
   
     
  0.662
Si001073m
Uncharacterized protein (514 aa)
   
     
  0.661
Si022114m
Uncharacterized protein (429 aa)
   
     
  0.660
Si015686m
Uncharacterized protein (493 aa)
   
     
  0.660
Si007950m
Uncharacterized protein (519 aa)
   
     
  0.659
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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