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Si036748m Si036748m Si006550m Si006550m Si022558m Si022558m Si023304m Si023304m Si029847m Si029847m Si037024m Si037024m Si005280m Si005280m Si002275m Si002275m Si018102m Si018102m rpoA rpoA Si020788m Si020788m
"Si005280m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005280mUncharacterized protein (198 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si037024m
Uncharacterized protein (270 aa)
 
  0.999
Si002275m
Uncharacterized protein (319 aa)
 
  0.998
Si018102m
Uncharacterized protein (266 aa)
 
  0.998
Si036748m
Uncharacterized protein (308 aa)
 
  0.998
Si023304m
Uncharacterized protein (197 aa)
 
  0.998
Si006550m
Uncharacterized protein (413 aa)
 
  0.998
Si022558m
Ribosomal protein (344 aa)
 
  0.998
Si029847m
Uncharacterized protein (443 aa)
   
  0.998
Si020788m
Uncharacterized protein (259 aa)
   
  0.998
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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