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Si039483m Si039483m Si038799m Si038799m Si039581m Si039581m Si026354m Si026354m Si035806m Si035806m Si038685m Si038685m Si005458m Si005458m Si035616m Si035616m Si004867m Si004867m Si032719m Si032719m Si035484m Si035484m
"Si005458m" - Pectinesterase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005458mPectinesterase (252 aa)    
Predicted Functional Partners:
Si026354m
Uncharacterized protein (453 aa)
 
   
  0.552
Si004867m
Pectinesterase (195 aa)
   
          0.479
Si039581m
Uncharacterized protein (412 aa)
       
  0.462
Si039483m
Uncharacterized protein (430 aa)
       
  0.462
Si038799m
Uncharacterized protein (378 aa)
       
  0.462
Si038685m
Uncharacterized protein (396 aa)
       
  0.462
Si035806m
Uncharacterized protein (429 aa)
       
  0.462
Si035616m
Uncharacterized protein (456 aa)
       
  0.462
Si035484m
Uncharacterized protein (475 aa)
       
  0.462
Si032719m
Uncharacterized protein (473 aa)
       
  0.462
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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