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Si001152m Si001152m Si035217m Si035217m Si007133m Si007133m Si028689m Si028689m Si033595m Si033595m Si037367m Si037367m Si000945m Si000945m Si000876m Si000876m Si006025m Si006025m Si005676m Si005676m Si002589m Si002589m
"Si005676m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005676mUncharacterized protein (1575 aa)    
Predicted Functional Partners:
Si028689m
Uncharacterized protein (1385 aa)
     
  0.996
Si002589m
Uncharacterized protein (263 aa)
     
  0.994
Si006025m
Uncharacterized protein (654 aa)
     
  0.993
Si000876m
Uncharacterized protein (557 aa)
     
  0.992
Si033595m
Uncharacterized protein (157 aa)
       
  0.992
Si035217m
Uncharacterized protein (516 aa)
     
  0.990
Si001152m
Uncharacterized protein (499 aa)
     
  0.990
Si000945m
Uncharacterized protein (540 aa)
     
  0.988
Si007133m
Uncharacterized protein (255 aa)
     
  0.987
Si037367m
Uncharacterized protein (227 aa)
     
  0.980
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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