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Si006997m Si006997m Si031382m Si031382m Si034521m Si034521m Si005707m Si005707m Si007423m Si007423m Si025152m Si025152m Si035511m Si035511m Si037173m Si037173m Si013235m Si013235m Si001620m Si001620m Si016810m Si016810m
"Si005707m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005707mUncharacterized protein (1242 aa)    
Predicted Functional Partners:
Si001620m
Uncharacterized protein (416 aa)
     
  0.816
Si013235m
Uncharacterized protein (882 aa)
         
 
0.800
Si035511m
Uncharacterized protein (471 aa)
       
  0.744
Si031382m
Uncharacterized protein (153 aa)
       
  0.723
Si007423m
Uncharacterized protein (153 aa)
       
  0.723
Si006997m
Uncharacterized protein (300 aa)
         
  0.718
Si037173m
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (249 aa)
       
  0.712
Si034521m
Uncharacterized protein (685 aa)
     
 
  0.698
Si025152m
Uncharacterized protein (566 aa)
     
  0.697
Si016810m
Uncharacterized protein (554 aa)
     
  0.697
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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