Full Link:
STRINGSTRING
Si037605m Si037605m Si005809m Si005809m Si010470m Si010470m Si026563m Si026563m Si038053m Si038053m Si021713m Si021713m Si035751m Si035751m Si018767m Si018767m
"Si005809m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005809mUncharacterized protein (915 aa)    
Predicted Functional Partners:
Si038053m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (123 aa)
           
  0.487
Si026563m
Uncharacterized protein (357 aa)
           
  0.485
Si010470m
Uncharacterized protein (352 aa)
           
  0.485
Si037605m
Uncharacterized protein (195 aa)
           
  0.468
Si018767m
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (110 aa)
           
  0.418
Si035751m
Uncharacterized protein (439 aa)
           
  0.412
Si021713m
Uncharacterized protein (535 aa)
           
  0.412
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)