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Si004308m Si004308m Si036173m Si036173m Si001206m Si001206m Si021342m Si021342m Si016456m Si016456m Si037595m Si037595m Si000286m Si000286m Si025993m Si025993m Si007939m Si007939m Si004342m Si004342m Si005876m Si005876m
"Si005876m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si005876mUncharacterized protein (808 aa)    
Predicted Functional Partners:
Si016456m
DNA helicase (729 aa)
     
  0.997
Si000286m
DNA helicase (850 aa)
     
  0.997
Si004342m
Uncharacterized protein (406 aa)
     
0.996
Si001206m
Uncharacterized protein (489 aa)
     
0.996
Si025993m
DNA helicase (803 aa)
     
  0.995
Si007939m
DNA helicase (665 aa)
     
  0.995
Si036173m
Uncharacterized protein (379 aa)
     
  0.994
Si037595m
Uncharacterized protein (197 aa)
     
  0.994
Si004308m
Origin recognition complex subunit 4 ; Component of the origin recognition complex (ORC) that binds origins of replication (424 aa)
     
  0.993
Si021342m
DNA helicase (720 aa)
     
  0.992
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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