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rpl23 rpl23 Si006233m Si006233m Si031425m Si031425m Si034791m Si034791m Si019535m Si019535m Si010537m Si010537m Si037024m Si037024m Si018593m Si018593m Si006013m Si006013m Si000167m Si000167m Si016247m Si016247m
"Si006013m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006013mUncharacterized protein (666 aa)    
Predicted Functional Partners:
Si006233m
Uncharacterized protein (526 aa)
       
 
  0.882
Si000167m
Uncharacterized protein (1006 aa)
   
  0.858
Si034791m
Uncharacterized protein (600 aa)
     
      0.855
Si010537m
Uncharacterized protein (338 aa)
     
      0.855
Si016247m
Uncharacterized protein (930 aa)
   
  0.845
Si037024m
Uncharacterized protein (270 aa)
       
 
  0.838
Si031425m
Uncharacterized protein (145 aa)
       
 
  0.838
Si019535m
Uncharacterized protein (145 aa)
       
 
  0.838
rpl23
Ribosomal protein L23 (93 aa)
       
 
  0.836
Si018593m
Uncharacterized protein (151 aa)
       
 
  0.836
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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