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Si026088m Si026088m Si039656m Si039656m Si035360m Si035360m Si001779m Si001779m Si021688m Si021688m Si035050m Si035050m Si009486m Si009486m Si006073m Si006073m Si015765m Si015765m Si025841m Si025841m Si034308m Si034308m
"Si006073m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006073mUncharacterized protein (622 aa)    
Predicted Functional Partners:
Si035360m
3-ketoacyl-CoA synthase (494 aa)
     
   
  0.502
Si039656m
Uncharacterized protein (1167 aa)
     
   
  0.483
Si009486m
Uncharacterized protein (724 aa)
     
   
  0.480
Si035050m
3-ketoacyl-CoA synthase (542 aa)
     
   
  0.473
Si021688m
Annotation not available (542 aa)
     
   
  0.473
Si026088m
Uncharacterized protein (661 aa)
           
  0.468
Si025841m
Uncharacterized protein (1129 aa)
           
  0.468
Si001779m
Uncharacterized protein (392 aa)
           
  0.468
Si034308m
Uncharacterized protein (801 aa)
           
  0.459
Si015765m
Uncharacterized protein (524 aa)
           
  0.408
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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