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Si028985m Si028985m Si016473m Si016473m Si002208m Si002208m Si014468m Si014468m Si017296m Si017296m Si006087m Si006087m Si013996m Si013996m Si016390m Si016390m Si009445m Si009445m Si010025m Si010025m Si009498m Si009498m
"Si006087m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006087mUncharacterized protein (617 aa)    
Predicted Functional Partners:
Si013996m
Uncharacterized protein (356 aa)
     
  0.919
Si017296m
Uncharacterized protein (425 aa)
     
  0.913
Si009445m
Gamma-tubulin complex component ; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (754 aa)
     
 
  0.687
Si014468m
Uncharacterized protein (206 aa)
           
  0.659
Si002208m
Uncharacterized protein (328 aa)
           
  0.615
Si028985m
Uncharacterized protein (787 aa)
         
  0.589
Si016473m
Uncharacterized protein (715 aa)
         
  0.517
Si016390m
Uncharacterized protein (766 aa)
     
 
  0.501
Si010025m
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (469 aa)
     
 
  0.466
Si009498m
Gamma-tubulin complex component ; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (709 aa)
     
 
    0.463
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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