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Si034027m Si034027m Si016091m Si016091m Si013185m Si013185m Si038755m Si038755m Si032025m Si032025m Si021352m Si021352m Si034012m Si034012m Si006123m Si006123m Si017383m Si017383m Si021062m Si021062m Si016259m Si016259m
"Si006123m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006123mUncharacterized protein (586 aa)    
Predicted Functional Partners:
Si021352m
Kinesin-like protein (709 aa)
     
  0.968
Si016091m
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1480 aa)
     
        0.922
Si034027m
Uncharacterized protein (1060 aa)
     
  0.907
Si034012m
Uncharacterized protein (1084 aa)
     
  0.907
Si021062m
Uncharacterized protein (1042 aa)
     
  0.907
Si016259m
Kinesin-like protein (912 aa)
     
  0.907
Si013185m
Uncharacterized protein (1008 aa)
     
  0.907
Si017383m
Uncharacterized protein (406 aa)
     
 
  0.884
Si038755m
Uncharacterized protein (288 aa)
     
   
  0.836
Si032025m
Uncharacterized protein (283 aa)
     
   
  0.836
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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