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Si037654m Si037654m Si018102m Si018102m rpoA rpoA Si003072m Si003072m Si036951m Si036951m Si020788m Si020788m Si002275m Si002275m Si011152m Si011152m Si006143m Si006143m Si002374m Si002374m Si004525m Si004525m
"Si006143m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006143mUncharacterized protein (574 aa)    
Predicted Functional Partners:
rpoA
RNA polymerase alpha subunit (261 aa)
   
  0.999
Si036951m
Uncharacterized protein (279 aa)
 
  0.996
Si037654m
Uncharacterized protein (189 aa)
   
  0.996
Si004525m
Uncharacterized protein (298 aa)
   
  0.996
Si002374m
Uncharacterized protein (303 aa)
   
  0.996
Si011152m
Uncharacterized protein (180 aa)
   
  0.995
Si003072m
Uncharacterized protein (181 aa)
   
  0.995
Si002275m
Uncharacterized protein (319 aa)
 
  0.990
Si018102m
Uncharacterized protein (266 aa)
   
  0.987
Si020788m
Uncharacterized protein (259 aa)
 
  0.985
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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