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Si006184m Si006184m Si038321m Si038321m Si018645m Si018645m Si023742m Si023742m Si023775m Si023775m ABH1 ABH1 Si003474m Si003474m Si003449m Si003449m Si014746m Si014746m Si011444m Si011444m Si011415m Si011415m
"Si006184m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006184mUncharacterized protein (548 aa)    
Predicted Functional Partners:
Si018645m
Uncharacterized protein (140 aa)
       
  0.971
Si011444m
Uncharacterized protein (97 aa)
       
  0.971
Si023775m
Uncharacterized protein (97 aa)
     
    0.971
Si003474m
Uncharacterized protein (98 aa)
     
    0.971
Si014746m
Uncharacterized protein (88 aa)
       
  0.960
Si023742m
Uncharacterized protein (104 aa)
     
  0.944
Si011415m
Uncharacterized protein (105 aa)
     
  0.944
Si003449m
Uncharacterized protein (104 aa)
     
  0.944
ABH1
Nuclear cap-binding protein subunit 1 (887 aa)
     
    0.939
Si038321m
Uncharacterized protein (80 aa)
       
  0.936
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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