Full Link:
STRINGSTRING
Si035100m Si035100m Si039128m Si039128m Si006192m Si006192m Si035549m Si035549m Si037655m Si037655m Si037632m Si037632m Si029518m Si029518m Si020125m Si020125m Si031176m Si031176m Si031622m Si031622m Si031391m Si031391m
"Si006192m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006192mUncharacterized protein (545 aa)    
Predicted Functional Partners:
Si035549m
Uncharacterized protein (465 aa)
   
   
 
0.918
Si029518m
Uncharacterized protein (516 aa)
   
     
  0.660
Si035100m
Uncharacterized protein (534 aa)
     
 
  0.649
Si020125m
Uncharacterized protein (168 aa)
   
     
  0.596
Si039128m
Uncharacterized protein (226 aa)
     
  0.593
Si037655m
Uncharacterized protein (189 aa)
     
  0.593
Si037632m
Uncharacterized protein (192 aa)
     
  0.593
Si031622m
Uncharacterized protein (97 aa)
     
  0.593
Si031391m
Uncharacterized protein (151 aa)
     
  0.593
Si031176m
Uncharacterized protein (195 aa)
     
  0.593
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
Server load: low (1%)