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Si009794m Si009794m Si035518m Si035518m Si029784m Si029784m Si031051m Si031051m Si006200m Si006200m Si016270m Si016270m Si029424m Si029424m Si019773m Si019773m Si028677m Si028677m Si020943m Si020943m Si000006m Si000006m
"Si006200m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006200mUncharacterized protein (542 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
   
 
  0.970
Si000006m
Uncharacterized protein (2163 aa)
   
 
  0.970
Si028677m
Uncharacterized protein (1497 aa)
     
 
  0.961
Si035518m
Uncharacterized protein (471 aa)
     
  0.944
Si016270m
Uncharacterized protein (890 aa)
   
  0.932
Si019773m
Uncharacterized protein (256 aa)
   
  0.894
Si009794m
Uncharacterized protein (533 aa)
     
  0.883
Si029424m
Thioredoxin reductase (544 aa)
   
 
  0.880
Si029784m
Uncharacterized protein (459 aa)
   
  0.865
Si031051m
Uncharacterized protein (221 aa)
   
  0.863
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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