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Si025858m Si025858m Si000166m Si000166m Si033895m Si033895m Si000348m Si000348m Si000061m Si000061m Si029424m Si029424m Si006239m Si006239m Si033896m Si033896m Si021235m Si021235m Si013520m Si013520m Si031093m Si031093m
"Si006239m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006239mUncharacterized protein (523 aa)    
Predicted Functional Partners:
Si029424m
Thioredoxin reductase (544 aa)
   
 
  0.516
Si021235m
Uncharacterized protein (818 aa)
              0.503
Si000348m
Uncharacterized protein (803 aa)
              0.503
Si033896m
Uncharacterized protein (1418 aa)
   
   
  0.497
Si033895m
Uncharacterized protein (1418 aa)
   
   
  0.497
Si000061m
Uncharacterized protein (1340 aa)
   
   
  0.472
Si013520m
Uncharacterized protein (545 aa)
         
  0.452
Si025858m
Uncharacterized protein (1070 aa)
   
   
  0.436
Si000166m
Protein translocase subunit SecA (1008 aa)
   
   
  0.436
Si031093m
Uncharacterized protein (213 aa)
   
   
  0.426
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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