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Si037401m Si037401m Si032031m Si032031m Si034793m Si034793m Si026148m Si026148m Si006315m Si006315m Si028677m Si028677m Si001941m Si001941m Si020943m Si020943m Si000006m Si000006m Si021760m Si021760m Si007055m Si007055m
"Si006315m" - Glycosyltransferase in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006315mGlycosyltransferase (487 aa)    
Predicted Functional Partners:
Si020943m
Uncharacterized protein (2158 aa)
           
  0.468
Si000006m
Uncharacterized protein (2163 aa)
           
  0.468
Si021760m
Phosphohexokinase ; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis (522 aa)
           
  0.459
Si007055m
Transcription initiation factor IIE subunit beta ; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (279 aa)
           
  0.457
Si001941m
Uncharacterized protein (366 aa)
           
  0.456
Si028677m
Uncharacterized protein (1497 aa)
           
  0.445
Si037401m
Uncharacterized protein (224 aa)
         
  0.415
Si034793m
Uncharacterized protein (599 aa)
         
  0.415
Si032031m
Uncharacterized protein (461 aa)
         
  0.415
Si026148m
Uncharacterized protein (592 aa)
         
  0.415
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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