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Si010218m Si010218m Si035909m Si035909m Si035891m Si035891m Si029035m Si029035m Si029927m Si029927m Si006385m Si006385m Si005892m Si005892m Si017412m Si017412m Si017363m Si017363m Si016057m Si016057m
"Si006385m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006385mUncharacterized protein (461 aa)    
Predicted Functional Partners:
Si029927m
Uncharacterized protein (427 aa)
   
          0.504
Si017412m
Uncharacterized protein (400 aa)
   
          0.481
Si010218m
Uncharacterized protein (416 aa)
   
          0.480
Si035891m
Uncharacterized protein (414 aa)
   
          0.479
Si035909m
Uncharacterized protein (411 aa)
   
          0.474
Si017363m
Uncharacterized protein (411 aa)
   
          0.468
Si029035m
Uncharacterized protein (750 aa)
           
  0.412
Si016057m
Uncharacterized protein (2653 aa)
           
  0.412
Si005892m
Uncharacterized protein (787 aa)
           
  0.412
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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