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Si006583m Si006583m Si038742m Si038742m Si039110m Si039110m Si035039m Si035039m Si006427m Si006427m Si031029m Si031029m Si034922m Si034922m Si034889m Si034889m Si001253m Si001253m Si021917m Si021917m Si017403m Si017403m
"Si006427m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006427mUncharacterized protein (446 aa)    
Predicted Functional Partners:
Si038742m
Phosphoglycerate kinase (651 aa)
 
  0.998
Si017403m
Phosphoglycerate kinase (402 aa)
 
  0.997
Si006583m
Phosphoglycerate kinase (401 aa)
 
  0.997
Si001253m
Phosphoglycerate kinase (482 aa)
 
  0.997
Si021917m
Phosphoglycerate kinase (480 aa)
 
  0.997
Si039110m
Pyruvate kinase (510 aa)
   
  0.995
Si035039m
Pyruvate kinase (545 aa)
   
  0.995
Si034922m
Pyruvate kinase (568 aa)
   
  0.995
Si034889m
Pyruvate kinase (575 aa)
   
  0.995
Si031029m
Pyruvate kinase (225 aa)
   
  0.995
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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