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Si009392m Si009392m Si034295m Si034295m Si013627m Si013627m Si013492m Si013492m Si017206m Si017206m Si006440m Si006440m Si005719m Si005719m Si019677m Si019677m Si021445m Si021445m Si009718m Si009718m Si013487m Si013487m
"Si006440m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006440mUncharacterized protein (442 aa)    
Predicted Functional Partners:
Si005719m
Alpha-mannosidase (1183 aa)
     
 
  0.947
Si009718m
alpha-1,2-Mannosidase (564 aa)
     
  0.941
Si021445m
alpha-1,2-Mannosidase (642 aa)
     
  0.940
Si013487m
alpha-1,2-Mannosidase (574 aa)
     
  0.940
Si017206m
Uncharacterized protein (445 aa)
           
  0.619
Si013492m
Uncharacterized protein (571 aa)
           
  0.613
Si034295m
Uncharacterized protein (809 aa)
           
  0.468
Si009392m
Uncharacterized protein (797 aa)
           
  0.468
Si013627m
Uncharacterized protein (494 aa)
     
   
  0.452
Si019677m
Uncharacterized protein (410 aa)
           
  0.447
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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