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Si006530m Si006530m Si036344m Si036344m Si017912m Si017912m Si035587m Si035587m Si021344m Si021344m Si002398m Si002398m Si033837m Si033837m Si000465m Si000465m Si016347m Si016347m Si017689m Si017689m ACC-R ACC-R
"Si006530m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006530mUncharacterized protein (417 aa)    
Predicted Functional Partners:
Si021344m
Uncharacterized protein (719 aa)
   
  0.928
Si016347m
Uncharacterized protein (799 aa)
   
  0.928
Si000465m
Uncharacterized protein (723 aa)
   
  0.928
Si033837m
Uncharacterized protein (2266 aa)
   
 
  0.902
ACC-R
Acetyl-coenzyme A carboxylase (2321 aa)
   
 
  0.902
Si002398m
Uncharacterized protein (299 aa)
 
 
  0.830
Si017689m
Uncharacterized protein (346 aa)
 
 
  0.795
Si017912m
Uncharacterized protein (302 aa)
 
  0.775
Si036344m
Uncharacterized protein (359 aa)
 
  0.748
Si035587m
Uncharacterized protein (461 aa)
   
 
  0.732
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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