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Si036850m Si036850m Si001428m Si001428m Si000008m Si000008m Si034643m Si034643m Si028635m Si028635m Si006534m Si006534m Si016348m Si016348m Si001613m Si001613m Si002689m Si002689m
"Si006534m" - Uncharacterized protein in Setaria italica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Si006534mUncharacterized protein (416 aa)    
Predicted Functional Partners:
Si016348m
Uncharacterized protein (798 aa)
     
      0.661
Si034643m
Uncharacterized protein (638 aa)
     
      0.655
Si000008m
Uncharacterized protein (2080 aa)
           
  0.530
Si036850m
Uncharacterized protein (295 aa)
           
  0.461
Si001613m
Uncharacterized protein (417 aa)
           
  0.420
Si001428m
Uncharacterized protein (449 aa)
           
  0.420
Si002689m
Uncharacterized protein (247 aa)
           
  0.416
Si028635m
Uncharacterized protein (4862 aa)
           
  0.407
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Paniceae, S. italica, Setaria, Setaria P.Beauv., Setaria italica, Setaria italica (L.) P.Beauv., foxtail millet
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